Sample Workflows and Usage

Below are some examples of workflows that can be accomplished in Nanome 2.0, including using MARA to open and prep structures.

Opening from MARA

• Log into MARA and Nanome with the same account credentials.
• Create a new MARA chat.
• Prompt MARA to load a structure of your choice and MARA will render the structure in the Molstar Visualizer.
  • Example Prompt: "Load 67o" --> loads in Molstar viewer panel.
• Click the button to "Open in XR", and a message will appear in MARA.
• Go to the Nanome app in your XR headset - the structure will be there as a new workspace named after the chat.

Note: The workspace will be set to ‘private’ so it cannot be shared.

Limitations: Each ‘open in headset’ from MARA will create a new workspace. Representations might not be exact between Molstar and Nanome. In those cases, our team is happy to help. Please reach out to us at support@nanome.ai to help us build solutions for representations.

Sharing Workspace

• Open Collaboration and click ‘Permissions’. There are two main methods to do this:
  • Set the workspace code from ‘Private’ to ‘Viewer’ or ‘Editor’ depending on your needs, then tell your colleagues the code.
  • Invite a user directly by email if they have a Nanome account. (This must be an exact email match, there is no auto-completion.)
• Each user that joins with the code or was added via email will appear in the workspace list.
  • Each user permission can be individually managed (including setting to none).